Dca46197.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q7Y1N4_ORYSJ#Putative retrotransposon gag protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0053G10.17#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold5493)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46197.1 |
2 |
162 |
668 |
8.68 |
161 |
37 |
7e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
128 |
286 |
1717 |
9.26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5493 |
Augustus |
mRNA |
3686 |
8852 |
. |
- |
. |
ID=Dca46197.1;Parent=Dca46197 |
| scaffold5493 |
Augustus |
exon |
3686 |
3807 |
. |
- |
. |
ID=Dca46197.1.exon1;Parent=Dca46197.1 |
| scaffold5493 |
Augustus |
exon |
6638 |
7261 |
. |
- |
. |
ID=Dca46197.1.exon2;Parent=Dca46197.1 |
| scaffold5493 |
Augustus |
exon |
7350 |
8126 |
. |
- |
. |
ID=Dca46197.1.exon3;Parent=Dca46197.1 |
| scaffold5493 |
Augustus |
exon |
8369 |
8852 |
. |
- |
. |
ID=Dca46197.1.exon4;Parent=Dca46197.1 |
