Carnation DB

Dca46202.1

Annotation

5-exons
f-1
sp|B9I1P5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_822960#unknown#0F0P0C
AT2G33990.1 | Symbols: iqd9 | IQ-domain 9 | chr2:14360502-14361630 REVERSE LENGTH=263
Repeat List (scaffold5494)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46202.1	1	294	307	56.67	294	58	7e-90
Target_name	Start	End	Length	Cov(%)
sp\|B9I1P5_POPTR	1	299	312	95.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46202.1	1	283	307	44.62	283	49	9e-64
Target_name	Start	End	Length	Cov(%)
AT2G33990.1	1	263	263	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5494	Augus-PASA	mRNA	7651	10614	.	-	.	ID=Dca46202.1;Parent=Dca46202
scaffold5494	Augus-PASA	exon	7651	8004	.	-	.	ID=Dca46202.1.exon1;Parent=Dca46202.1
scaffold5494	Augus-PASA	exon	8354	8467	.	-	.	ID=Dca46202.1.exon2;Parent=Dca46202.1
scaffold5494	Augus-PASA	exon	9070	9297	.	-	.	ID=Dca46202.1.exon3;Parent=Dca46202.1
scaffold5494	Augus-PASA	exon	9690	9842	.	-	.	ID=Dca46202.1.exon4;Parent=Dca46202.1
scaffold5494	Augustus	exon	10540	10614	.	-	.	ID=Dca46202.1.exon5;Parent=Dca46202.1