Carnation DB

Dca46221.1

Annotation

6-exons
f-1
sp|F6HGN5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g00760#GO:0003677;GO:0006355;GO:0006744#1F2P0C
AT1G19140.2 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COQ9 (InterPro:IPR013718), Ubiquinone biosynthesis protein COQ9 (InterPro:IPR012762); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:6611026-6612414 REVERSE LENGTH=312
Repeat List (scaffold55)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46221.1	86	301	305	54.42	216	77	2e-98
Target_name	Start	End	Length	Cov(%)
sp\|F6HGN5_VITVI	94	308	318	67.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46221.1	1	303	305	61.31	303	61	4e-97
Target_name	Start	End	Length	Cov(%)
AT1G19140.2	1	299	312	95.83

seqname	source	feature	start	end	score	strand	frame	group
scaffold55	Augus-PASA	mRNA	69846	73770	.	+	.	ID=Dca46221.1;Parent=Dca46221
scaffold55	Augus-PASA	exon	69846	70166	.	+	.	ID=Dca46221.1.exon1;Parent=Dca46221.1
scaffold55	Augus-PASA	exon	70709	70816	.	+	.	ID=Dca46221.1.exon2;Parent=Dca46221.1
scaffold55	Augus-PASA	exon	71626	71790	.	+	.	ID=Dca46221.1.exon3;Parent=Dca46221.1
scaffold55	Augus-PASA	exon	72532	72703	.	+	.	ID=Dca46221.1.exon4;Parent=Dca46221.1
scaffold55	Augus-PASA	exon	73531	73604	.	+	.	ID=Dca46221.1.exon5;Parent=Dca46221.1
scaffold55	Augus-PASA	exon	73693	73770	.	+	.	ID=Dca46221.1.exon6;Parent=Dca46221.1