Carnation DB

Dca46222.1

Annotation

5-exons
f-1
sp|B9RR75_RICCO#Polygalacturonase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0710990#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
Repeat List (scaffold55)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46222.1	2	483	483	80.74	482	81	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RR75_RICCO	11	494	494	97.97

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46222.1	2	483	483	72.87	482	72	0
Target_name	Start	End	Length	Cov(%)
AT1G19170.1	12	506	506	97.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold55	Augustus	mRNA	78727	82777	.	+	.	ID=Dca46222.1;Parent=Dca46222
scaffold55	Augustus	exon	78727	79128	.	+	.	ID=Dca46222.1.exon1;Parent=Dca46222.1
scaffold55	Augustus	exon	80871	80991	.	+	.	ID=Dca46222.1.exon2;Parent=Dca46222.1
scaffold55	Augus-PASA	exon	81337	81585	.	+	.	ID=Dca46222.1.exon3;Parent=Dca46222.1
scaffold55	Augus-PASA	exon	81955	82108	.	+	.	ID=Dca46222.1.exon4;Parent=Dca46222.1
scaffold55	Augus-PASA	exon	82252	82777	.	+	.	ID=Dca46222.1.exon5;Parent=Dca46222.1