Carnation DB

Dca46229.1

Annotation

10-exons
f-1
sp|B9IQ65_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_826211#GO:0005524;GO:0008026;GO:0003676#3F0P0C
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:16976783-16979392 FORWARD LENGTH=609
Repeat List (scaffold55)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46229.1	18	577	583	71.18	560	73	0
Target_name	Start	End	Length	Cov(%)
sp\|B9IQ65_POPTR	16	587	594	96.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46229.1	2	566	583	63.97	565	65	0
Target_name	Start	End	Length	Cov(%)
AT2G40700.1	7	585	609	95.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold55	Augus-PASA	mRNA	190079	195629	.	-	.	ID=Dca46229.1;Parent=Dca46229
scaffold55	Augus-PASA	exon	190079	190333	.	-	.	ID=Dca46229.1.exon1;Parent=Dca46229.1
scaffold55	Augus-PASA	exon	190719	190965	.	-	.	ID=Dca46229.1.exon2;Parent=Dca46229.1
scaffold55	Augustus	exon	191435	191739	.	-	.	ID=Dca46229.1.exon3;Parent=Dca46229.1
scaffold55	Augustus	exon	192351	192424	.	-	.	ID=Dca46229.1.exon4;Parent=Dca46229.1
scaffold55	Augustus	exon	192519	192841	.	-	.	ID=Dca46229.1.exon5;Parent=Dca46229.1
scaffold55	Augustus	exon	192928	193036	.	-	.	ID=Dca46229.1.exon6;Parent=Dca46229.1
scaffold55	Augustus	exon	193285	193428	.	-	.	ID=Dca46229.1.exon7;Parent=Dca46229.1
scaffold55	Augustus	exon	194410	194513	.	-	.	ID=Dca46229.1.exon8;Parent=Dca46229.1
scaffold55	Augustus	exon	195318	195390	.	-	.	ID=Dca46229.1.exon9;Parent=Dca46229.1
scaffold55	Augustus	exon	195512	195629	.	-	.	ID=Dca46229.1.exon10;Parent=Dca46229.1