Carnation DB

Dca46232.1

Annotation

18-exons
f-1
sp|F6HJX8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0035g02290#GO:0005488#1F0P0C
Os02t0782100-01 Uncharacterised domain NUC173 domain containing protein.
Repeat List (scaffold55)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46232.1	16	1241	1264	58.06	1226	60	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HJX8_VITVI	1	1233	1261	97.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46232.1	36	1253	1264	51.34	1218	53	0
Target_name	Start	End	Length	Cov(%)
AT2G34357.1	43	1261	1280	95.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold55	Augustus	mRNA	214366	224485	.	-	.	ID=Dca46232.1;Parent=Dca46232
scaffold55	Augustus	exon	214366	214936	.	-	.	ID=Dca46232.1.exon1;Parent=Dca46232.1
scaffold55	Augustus	exon	215029	215151	.	-	.	ID=Dca46232.1.exon2;Parent=Dca46232.1
scaffold55	Augustus	exon	215340	215416	.	-	.	ID=Dca46232.1.exon3;Parent=Dca46232.1
scaffold55	Augustus	exon	215520	215621	.	-	.	ID=Dca46232.1.exon4;Parent=Dca46232.1
scaffold55	Augustus	exon	216194	216322	.	-	.	ID=Dca46232.1.exon5;Parent=Dca46232.1
scaffold55	Augustus	exon	216427	216588	.	-	.	ID=Dca46232.1.exon6;Parent=Dca46232.1
scaffold55	Augustus	exon	216994	217107	.	-	.	ID=Dca46232.1.exon7;Parent=Dca46232.1
scaffold55	Augustus	exon	217733	217804	.	-	.	ID=Dca46232.1.exon8;Parent=Dca46232.1
scaffold55	Augustus	exon	217922	218056	.	-	.	ID=Dca46232.1.exon9;Parent=Dca46232.1
scaffold55	Augustus	exon	218606	218662	.	-	.	ID=Dca46232.1.exon10;Parent=Dca46232.1
scaffold55	Augustus	exon	218746	218839	.	-	.	ID=Dca46232.1.exon11;Parent=Dca46232.1
scaffold55	Augustus	exon	218943	219118	.	-	.	ID=Dca46232.1.exon12;Parent=Dca46232.1
scaffold55	Augustus	exon	219725	220129	.	-	.	ID=Dca46232.1.exon13;Parent=Dca46232.1
scaffold55	Augustus	exon	220216	220425	.	-	.	ID=Dca46232.1.exon14;Parent=Dca46232.1
scaffold55	Augustus	exon	221333	221424	.	-	.	ID=Dca46232.1.exon15;Parent=Dca46232.1
scaffold55	Augustus	exon	221565	221825	.	-	.	ID=Dca46232.1.exon16;Parent=Dca46232.1
scaffold55	Augustus	exon	221921	222434	.	-	.	ID=Dca46232.1.exon17;Parent=Dca46232.1
scaffold55	Augustus	exon	223985	224485	.	-	.	ID=Dca46232.1.exon18;Parent=Dca46232.1