Dca46250.1
Annotation
- 4-exons
- f-1
- sp|A9T6N9_PHYPA#Predicted protein#Physcomitrella patens subsp patens (Moss)#ORFNames=PHYPADRAFT_141088#GO:0004222;GO:0008270;GO:0006508#2F1P0C
- Repeat List (scaffold55)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46250.1 |
3 |
174 |
177 |
33.89 |
172 |
32 |
9e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9T6N9_PHYPA |
523 |
709 |
969 |
19.29 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46250.1 |
3 |
175 |
177 |
31.07 |
173 |
30 |
5e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G56730.1 |
501 |
664 |
956 |
17.15 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold55 |
Augustus |
mRNA |
371614 |
372892 |
. |
- |
. |
ID=Dca46250.1;Parent=Dca46250 |
| scaffold55 |
Augustus |
exon |
371614 |
371724 |
. |
- |
. |
ID=Dca46250.1.exon1;Parent=Dca46250.1 |
| scaffold55 |
Augustus |
exon |
371971 |
372114 |
. |
- |
. |
ID=Dca46250.1.exon2;Parent=Dca46250.1 |
| scaffold55 |
Augustus |
exon |
372415 |
372627 |
. |
- |
. |
ID=Dca46250.1.exon3;Parent=Dca46250.1 |
| scaffold55 |
Augustus |
exon |
372827 |
372892 |
. |
- |
. |
ID=Dca46250.1.exon4;Parent=Dca46250.1 |
