Carnation DB

Dca46271.1

Annotation

12-exons
f-1
sp|B9HDW1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_561027#GO:0016459;GO:0003779;GO:0005524;GO:0003774#3F0P1C
sp|B9RK43_RICCO#Myosin XI, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1046280#GO:0016459;GO:0003779;GO:0005524;GO:0003774#3F0P1C
Repeat List (scaffold550)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46271.1	4	380	380	65.26	377	65	1e-128
Target_name	Start	End	Length	Cov(%)
sp\|B9HDW1_POPTR	1179	1539	1539	23.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46271.1	4	376	380	62.89	373	63	3e-127
Target_name	Start	End	Length	Cov(%)
AT5G20490.1	1181	1537	1545	23.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold550	Augustus	mRNA	159333	162971	.	+	.	ID=Dca46271.1;Parent=Dca46271
scaffold550	Augustus	exon	159333	159509	.	+	.	ID=Dca46271.1.exon1;Parent=Dca46271.1
scaffold550	Augustus	exon	159600	159800	.	+	.	ID=Dca46271.1.exon2;Parent=Dca46271.1
scaffold550	Augustus	exon	160848	160904	.	+	.	ID=Dca46271.1.exon3;Parent=Dca46271.1
scaffold550	Augustus	exon	160999	161055	.	+	.	ID=Dca46271.1.exon4;Parent=Dca46271.1
scaffold550	Augustus	exon	161175	161255	.	+	.	ID=Dca46271.1.exon5;Parent=Dca46271.1
scaffold550	Augustus	exon	161719	161789	.	+	.	ID=Dca46271.1.exon6;Parent=Dca46271.1
scaffold550	Augustus	exon	161905	162001	.	+	.	ID=Dca46271.1.exon7;Parent=Dca46271.1
scaffold550	Augustus	exon	162172	162228	.	+	.	ID=Dca46271.1.exon8;Parent=Dca46271.1
scaffold550	Augustus	exon	162323	162379	.	+	.	ID=Dca46271.1.exon9;Parent=Dca46271.1
scaffold550	Augustus	exon	162499	162579	.	+	.	ID=Dca46271.1.exon10;Parent=Dca46271.1
scaffold550	Augustus	exon	162666	162748	.	+	.	ID=Dca46271.1.exon11;Parent=Dca46271.1
scaffold550	Augustus	exon	162848	162971	.	+	.	ID=Dca46271.1.exon12;Parent=Dca46271.1