Dca46290.1
Annotation
- 4-exons
- f-1
- sp|F4NCI7_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold5507)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46290.1 |
9 |
393 |
471 |
39.27 |
385 |
49 |
6e-110
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCI7_BETVU |
572 |
956 |
1362 |
28.26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46290.1 |
13 |
370 |
471 |
27.81 |
358 |
37 |
5e-66
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
492 |
853 |
857 |
42.24 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5507 |
Augustus |
mRNA |
6020 |
10041 |
. |
- |
. |
ID=Dca46290.1;Parent=Dca46290 |
| scaffold5507 |
Augustus |
exon |
6020 |
6103 |
. |
- |
. |
ID=Dca46290.1.exon1;Parent=Dca46290.1 |
| scaffold5507 |
Augustus |
exon |
7562 |
7621 |
. |
- |
. |
ID=Dca46290.1.exon2;Parent=Dca46290.1 |
| scaffold5507 |
Augustus |
exon |
7718 |
7812 |
. |
- |
. |
ID=Dca46290.1.exon3;Parent=Dca46290.1 |
| scaffold5507 |
Augustus |
exon |
8865 |
10041 |
. |
- |
. |
ID=Dca46290.1.exon4;Parent=Dca46290.1 |
