Carnation DB

Dca46309.1

Annotation

7-exons
f-1
sp|F6HNR6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g02710#GO:0005089#1F0P0C
AT5G05940.1 | Symbols: ATROPGEF5, ROPGEF5 | ROP guanine nucleotide exchange factor 5 | chr5:1786028-1788363 FORWARD LENGTH=611
Repeat List (scaffold551)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46309.1	42	591	591	63.95	550	69	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HNR6_VITVI	56	594	596	90.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46309.1	45	556	591	56	512	63	0
Target_name	Start	End	Length	Cov(%)
AT5G05940.1	60	577	611	84.77

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold551	Augustus	mRNA	100925	104486	.	+	.	ID=Dca46309.1;Parent=Dca46309
scaffold551	Augustus	exon	100925	101174	.	+	.	ID=Dca46309.1.exon1;Parent=Dca46309.1
scaffold551	Augustus	exon	101289	101405	.	+	.	ID=Dca46309.1.exon2;Parent=Dca46309.1
scaffold551	Augustus	exon	102680	102834	.	+	.	ID=Dca46309.1.exon3;Parent=Dca46309.1
scaffold551	Augustus	exon	102928	103002	.	+	.	ID=Dca46309.1.exon4;Parent=Dca46309.1
scaffold551	Augustus	exon	103106	103399	.	+	.	ID=Dca46309.1.exon5;Parent=Dca46309.1
scaffold551	Augustus	exon	103488	103847	.	+	.	ID=Dca46309.1.exon6;Parent=Dca46309.1
scaffold551	Augustus	exon	103962	104486	.	+	.	ID=Dca46309.1.exon7;Parent=Dca46309.1