Dca46341.1
Annotation
- 4-exons
- f-1
- sp|Q9ZQQ3_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g14400#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold552)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46341.1 |
485 |
831 |
846 |
24.7 |
347 |
55 |
1e-117
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZQQ3_ARATH |
409 |
790 |
1466 |
26.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46341.1 |
549 |
835 |
846 |
10.4 |
287 |
31 |
1e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
63 |
345 |
591 |
47.88 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold552 |
Augustus |
mRNA |
66 |
3817 |
. |
- |
. |
ID=Dca46341.1;Parent=Dca46341 |
| scaffold552 |
Augustus |
exon |
66 |
955 |
. |
- |
. |
ID=Dca46341.1.exon1;Parent=Dca46341.1 |
| scaffold552 |
Augustus |
exon |
1366 |
2283 |
. |
- |
. |
ID=Dca46341.1.exon2;Parent=Dca46341.1 |
| scaffold552 |
Augustus |
exon |
2380 |
2934 |
. |
- |
. |
ID=Dca46341.1.exon3;Parent=Dca46341.1 |
| scaffold552 |
Augustus |
exon |
3641 |
3817 |
. |
- |
. |
ID=Dca46341.1.exon4;Parent=Dca46341.1 |
