Dca46398.1
Annotation
- 4-exons
- f-1
- sp|Q8H9F4_NICSY#41 kD chloroplast nucleoid DNA binding protein (CND41)#Nicotiana sylvestris (Wood tobacco) (South American tobacco)#Name=Nscnd41#GO:0004190;GO:0006508#1F1P0C
- Repeat List (scaffold553)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46398.1 |
11 |
475 |
476 |
55.67 |
465 |
54 |
6e-137
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8H9F4_NICSY |
12 |
501 |
502 |
97.6 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46398.1 |
56 |
475 |
476 |
47.68 |
420 |
55 |
8e-126
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G10770.1 |
60 |
473 |
474 |
87.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold553 |
Augustus |
mRNA |
115889 |
118055 |
. |
+ |
. |
ID=Dca46398.1;Parent=Dca46398 |
| scaffold553 |
Augustus |
exon |
115889 |
116042 |
. |
+ |
. |
ID=Dca46398.1.exon1;Parent=Dca46398.1 |
| scaffold553 |
Augustus |
exon |
116353 |
116655 |
. |
+ |
. |
ID=Dca46398.1.exon2;Parent=Dca46398.1 |
| scaffold553 |
Augustus |
exon |
116954 |
117411 |
. |
+ |
. |
ID=Dca46398.1.exon3;Parent=Dca46398.1 |
| scaffold553 |
Augustus |
exon |
117540 |
118055 |
. |
+ |
. |
ID=Dca46398.1.exon4;Parent=Dca46398.1 |
