Dca46409.1
Annotation
- 3-exons
- f-1
- sp|A5C4H4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_022301#GO:0005622;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold5532)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46409.1 |
153 |
841 |
884 |
29.29 |
689 |
34 |
1e-103
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5C4H4_VITVI |
554 |
1297 |
2174 |
34.22 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46409.1 |
707 |
847 |
884 |
4.97 |
141 |
31 |
1e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
213 |
349 |
707 |
19.37 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5532 |
Augustus |
mRNA |
677 |
7177 |
. |
- |
. |
ID=Dca46409.1;Parent=Dca46409 |
| scaffold5532 |
Augustus |
exon |
677 |
810 |
. |
- |
. |
ID=Dca46409.1.exon1;Parent=Dca46409.1 |
| scaffold5532 |
Augustus |
exon |
4546 |
5500 |
. |
- |
. |
ID=Dca46409.1.exon2;Parent=Dca46409.1 |
| scaffold5532 |
Augustus |
exon |
5612 |
7177 |
. |
- |
. |
ID=Dca46409.1.exon3;Parent=Dca46409.1 |
