Dca46416.1
Annotation
- 2-exons
- f-307
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold5534)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46416.1 |
3 |
634 |
634 |
52.2 |
632 |
52 |
1e-163
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
171 |
757 |
1717 |
34.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46416.1 |
378 |
470 |
634 |
5.67 |
93 |
39 |
1e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5534 |
Augustus |
mRNA |
20243 |
22967 |
. |
+ |
. |
ID=Dca46416.1;Parent=Dca46416 |
| scaffold5534 |
Augustus |
exon |
20243 |
20496 |
. |
+ |
. |
ID=Dca46416.1.exon1;Parent=Dca46416.1 |
| scaffold5534 |
Augustus |
exon |
21012 |
22967 |
. |
+ |
. |
ID=Dca46416.1.exon2;Parent=Dca46416.1 |
