Carnation DB

Dca46425.1

Annotation

7-exons
f-1
sp|D7T4P1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g00960#GO:0005524;GO:0004674#2F0P0C
sp|B9T562_RICCO#ATP binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0179120#GO:0005524;GO:0004674;GO:0004712#3F0P0C
Repeat List (scaffold554)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46425.1	9	169	601	11.98	161	43	2e-23
Target_name	Start	End	Length	Cov(%)
sp\|D7T4P1_VITVI	55	223	728	23.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46425.1	219	601	601	46.75	383	72	4e-162
Target_name	Start	End	Length	Cov(%)
Os01t0832900-01	349	729	730	52.19

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold554	Augustus	mRNA	25579	29897	.	+	.	ID=Dca46425.1;Parent=Dca46425
scaffold554	Augustus	exon	25579	25711	.	+	.	ID=Dca46425.1.exon1;Parent=Dca46425.1
scaffold554	Augustus	exon	27171	27858	.	+	.	ID=Dca46425.1.exon2;Parent=Dca46425.1
scaffold554	Augustus	exon	28109	28388	.	+	.	ID=Dca46425.1.exon3;Parent=Dca46425.1
scaffold554	Augus-PASA	exon	28481	28588	.	+	.	ID=Dca46425.1.exon4;Parent=Dca46425.1
scaffold554	Augus-PASA	exon	29110	29388	.	+	.	ID=Dca46425.1.exon5;Parent=Dca46425.1
scaffold554	Augus-PASA	exon	29474	29617	.	+	.	ID=Dca46425.1.exon6;Parent=Dca46425.1
scaffold554	Augus-PASA	exon	29724	29897	.	+	.	ID=Dca46425.1.exon7;Parent=Dca46425.1