Carnation DB

Dca46462.1

Annotation

5-exons
f-1
sp|B9GXC8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_711734#GO:0005634;GO:0046983;GO:0009734;GO:0006355;GO:0006351#1F3P1C
sp|B9RQI4_RICCO#Auxin-responsive protein IAA27, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1492640#GO:0005634;GO:0046983;GO:0009734;GO:0006355;GO:0006351#1F3P1C
Repeat List (scaffold555)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46462.1	25	187	192	61.45	163	72	8e-63
Target_name	Start	End	Length	Cov(%)
sp\|B9GXC8_POPTR	183	346	349	46.99

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46462.1	31	187	192	55.72	157	68	4e-58
Target_name	Start	End	Length	Cov(%)
AT2G22670.4	176	333	338	46.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold555	Augustus	mRNA	13620	14693	.	-	.	ID=Dca46462.1;Parent=Dca46462
scaffold555	Augustus	exon	13620	13663	.	-	.	ID=Dca46462.1.exon1;Parent=Dca46462.1
scaffold555	Augustus	exon	13768	13829	.	-	.	ID=Dca46462.1.exon2;Parent=Dca46462.1
scaffold555	Augustus	exon	13911	14049	.	-	.	ID=Dca46462.1.exon3;Parent=Dca46462.1
scaffold555	Augustus	exon	14133	14362	.	-	.	ID=Dca46462.1.exon4;Parent=Dca46462.1
scaffold555	Augustus	exon	14590	14693	.	-	.	ID=Dca46462.1.exon5;Parent=Dca46462.1