Carnation DB

Dca46476.1

Annotation

6-exons
f-1
sp|F6I5N1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0103g00660#GO:0008270#1F0P0C
Os04t0425100-01 Zinc finger, RING/FYVE/PHD-type domain containing protein.
Repeat List (scaffold5552)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46476.1	87	519	541	33.45	433	40	1e-72
Target_name	Start	End	Length	Cov(%)
sp\|F6I5N1_VITVI	62	485	508	83.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46476.1	215	508	541	20.33	294	37	2e-41
Target_name	Start	End	Length	Cov(%)
Os04t0425100-01	148	404	438	58.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5552	Augustus	mRNA	1311	6766	.	+	.	ID=Dca46476.1;Parent=Dca46476
scaffold5552	Augustus	exon	1311	2467	.	+	.	ID=Dca46476.1.exon1;Parent=Dca46476.1
scaffold5552	Augustus	exon	2630	2725	.	+	.	ID=Dca46476.1.exon2;Parent=Dca46476.1
scaffold5552	Augustus	exon	4293	4353	.	+	.	ID=Dca46476.1.exon3;Parent=Dca46476.1
scaffold5552	Augustus	exon	4483	4601	.	+	.	ID=Dca46476.1.exon4;Parent=Dca46476.1
scaffold5552	Augustus	exon	5485	5575	.	+	.	ID=Dca46476.1.exon5;Parent=Dca46476.1
scaffold5552	Augustus	exon	6665	6766	.	+	.	ID=Dca46476.1.exon6;Parent=Dca46476.1