Carnation DB

Dca46523.1

Annotation

5-exons
f-1
sp|D7U3B8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g04950#GO:0016021#0F0P1C
AT2G20230.1 | Symbols: | Tetraspanin family protein | chr2:8725762-8727388 FORWARD LENGTH=270
Repeat List (scaffold5562)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46523.1	1	167	179	53.63	167	58	2e-52
Target_name	Start	End	Length	Cov(%)
sp\|D7U3B8_VITVI	107	273	274	60.94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46523.1	1	165	179	46.92	165	51	1e-39
Target_name	Start	End	Length	Cov(%)
AT2G20230.1	105	264	270	59.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5562	Augustus	mRNA	37984	40247	.	-	.	ID=Dca46523.1;Parent=Dca46523
scaffold5562	Augustus	exon	37984	38049	.	-	.	ID=Dca46523.1.exon1;Parent=Dca46523.1
scaffold5562	Augustus	exon	38587	38790	.	-	.	ID=Dca46523.1.exon2;Parent=Dca46523.1
scaffold5562	Augustus	exon	39628	39732	.	-	.	ID=Dca46523.1.exon3;Parent=Dca46523.1
scaffold5562	Augustus	exon	39854	39934	.	-	.	ID=Dca46523.1.exon4;Parent=Dca46523.1
scaffold5562	Augustus	exon	40164	40247	.	-	.	ID=Dca46523.1.exon5;Parent=Dca46523.1