Carnation DB

Dca46551.1

Annotation

5-exons
f-1
sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
AT1G43760.1 | Symbols: | DNAse I-like superfamily protein | chr1:16528880-16531065 REVERSE LENGTH=626
Repeat List (scaffold557)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46551.1	908	1107	1200	6.08	200	37	5e-30
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG3_BETVU	686	883	1114	17.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46551.1	350	835	1200	12.33	486	30	8e-58
Target_name	Start	End	Length	Cov(%)
AT1G43760.1	180	621	626	70.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold557	Augustus	mRNA	105751	111781	.	-	.	ID=Dca46551.1;Parent=Dca46551
scaffold557	Augustus	exon	105751	106057	.	-	.	ID=Dca46551.1.exon1;Parent=Dca46551.1
scaffold557	Augustus	exon	106491	107020	.	-	.	ID=Dca46551.1.exon2;Parent=Dca46551.1
scaffold557	Augustus	exon	107266	109035	.	-	.	ID=Dca46551.1.exon3;Parent=Dca46551.1
scaffold557	Augustus	exon	109124	109418	.	-	.	ID=Dca46551.1.exon4;Parent=Dca46551.1
scaffold557	Augustus	exon	111081	111781	.	-	.	ID=Dca46551.1.exon5;Parent=Dca46551.1