Carnation DB

Dca46684.1

Annotation

6-exons
f-1
sp|A9PG28_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0043169;GO:0004553;GO:0005975#2F1P0C
sp|B9RBE5_RICCO#Glucan endo-1,3-beta-glucosidase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1674960#GO:0043169;GO:0042973;GO:0005975#2F1P0C
Repeat List (scaffold56)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46684.1	8	474	513	68.03	467	75	0
Target_name	Start	End	Length	Cov(%)
sp\|A9PG28_POPTR	3	456	456	99.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46684.1	8	470	513	60.81	463	68	3e-178
Target_name	Start	End	Length	Cov(%)
AT4G34480.1	5	448	504	88.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold56	Augus-PASA	mRNA	272365	276207	.	-	.	ID=Dca46684.1;Parent=Dca46684
scaffold56	Augus-PASA	exon	272365	272519	.	-	.	ID=Dca46684.1.exon1;Parent=Dca46684.1
scaffold56	Augus-PASA	exon	272714	273035	.	-	.	ID=Dca46684.1.exon2;Parent=Dca46684.1
scaffold56	Augus-PASA	exon	273143	273469	.	-	.	ID=Dca46684.1.exon3;Parent=Dca46684.1
scaffold56	Augus-PASA	exon	274113	274468	.	-	.	ID=Dca46684.1.exon4;Parent=Dca46684.1
scaffold56	Augus-PASA	exon	275335	275643	.	-	.	ID=Dca46684.1.exon5;Parent=Dca46684.1
scaffold56	Augus-PASA	exon	276135	276207	.	-	.	ID=Dca46684.1.exon6;Parent=Dca46684.1