Carnation DB

Dca46827.1

Annotation

6-exons
f-1
sp|F4J8C0_ARATH#YIF1 integral membrane domain-containing protein#Arabidopsis thaliana (Mouse-ear cress)#OrderedLocusNames=At3g59500#unknown#0F0P0C
Repeat List (scaffold563)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46827.1	53	319	319	64.57	267	78	4e-122
Target_name	Start	End	Length	Cov(%)
sp\|F4J8C0_ARATH	3	269	269	99.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46827.1	53	319	319	64.57	267	78	3e-123
Target_name	Start	End	Length	Cov(%)
AT3G59500.1	3	269	269	99.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold563	Augus-PASA	mRNA	29998	34514	.	-	.	ID=Dca46827.1;Parent=Dca46827
scaffold563	Augus-PASA	exon	29998	30385	.	-	.	ID=Dca46827.1.exon1;Parent=Dca46827.1
scaffold563	Augus-PASA	exon	31374	31525	.	-	.	ID=Dca46827.1.exon2;Parent=Dca46827.1
scaffold563	Augus-PASA	exon	31610	31708	.	-	.	ID=Dca46827.1.exon3;Parent=Dca46827.1
scaffold563	Augus-PASA	exon	32975	33226	.	-	.	ID=Dca46827.1.exon4;Parent=Dca46827.1
scaffold563	Augustus	exon	34178	34211	.	-	.	ID=Dca46827.1.exon5;Parent=Dca46827.1
scaffold563	Augustus	exon	34480	34514	.	-	.	ID=Dca46827.1.exon6;Parent=Dca46827.1