Dca46894.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5643)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46894.1 |
7 |
129 |
135 |
50.37 |
123 |
56 |
4e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
771 |
893 |
896 |
13.72 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46894.1 |
7 |
114 |
135 |
31.11 |
108 |
39 |
5e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1273 |
1378 |
1401 |
7.56 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5643 |
Augustus |
mRNA |
13215 |
13750 |
. |
+ |
. |
ID=Dca46894.1;Parent=Dca46894 |
| scaffold5643 |
Augustus |
exon |
13215 |
13231 |
. |
+ |
. |
ID=Dca46894.1.exon1;Parent=Dca46894.1 |
| scaffold5643 |
Augustus |
exon |
13360 |
13750 |
. |
+ |
. |
ID=Dca46894.1.exon2;Parent=Dca46894.1 |
