Dca47.1
Annotation
- 5-exons
- f-1
- sp|D7LSD7_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_486656#GO:0004806;GO:0006629#1F1P0C
- AT3G61680.1 | Symbols: | alpha/beta-Hydrolases superfamily protein | chr3:22824630-22826926 FORWARD LENGTH=649
- Repeat List (scaffold1)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47.1 |
18 |
587 |
610 |
50.16 |
570 |
50 |
6e-147
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7LSD7_ARALL |
22 |
629 |
652 |
93.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47.1 |
18 |
610 |
610 |
49.83 |
593 |
47 |
7e-146
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G61680.1 |
22 |
649 |
649 |
96.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1 |
Augustus |
mRNA |
466757 |
469231 |
. |
- |
. |
ID=Dca47.1;Parent=Dca47 |
| scaffold1 |
Augustus |
exon |
466757 |
467161 |
. |
- |
. |
ID=Dca47.1.exon1;Parent=Dca47.1 |
| scaffold1 |
Augustus |
exon |
467435 |
467800 |
. |
- |
. |
ID=Dca47.1.exon2;Parent=Dca47.1 |
| scaffold1 |
Augustus |
exon |
467933 |
467992 |
. |
- |
. |
ID=Dca47.1.exon3;Parent=Dca47.1 |
| scaffold1 |
Augustus |
exon |
468111 |
468581 |
. |
- |
. |
ID=Dca47.1.exon4;Parent=Dca47.1 |
| scaffold1 |
Augustus |
exon |
468701 |
469231 |
. |
- |
. |
ID=Dca47.1.exon5;Parent=Dca47.1 |
