Carnation DB

Dca47005.1

Annotation

7-exons
f-1
sp|F6HFG1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g05300#GO:0005488#1F0P0C
AT1G23180.1 | Symbols: | ARM repeat superfamily protein | chr1:8216125-8219515 FORWARD LENGTH=834
Repeat List (scaffold567)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47005.1	2	631	631	60.85	630	60	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HFG1_VITVI	236	880	880	73.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47005.1	2	631	631	51.98	630	52	1e-167
Target_name	Start	End	Length	Cov(%)
AT1G23180.1	214	834	834	74.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold567	Augustus	mRNA	123189	129540	.	+	.	ID=Dca47005.1;Parent=Dca47005
scaffold567	Augustus	exon	123189	123383	.	+	.	ID=Dca47005.1.exon1;Parent=Dca47005.1
scaffold567	Augustus	exon	124229	124878	.	+	.	ID=Dca47005.1.exon2;Parent=Dca47005.1
scaffold567	Augustus	exon	126083	126179	.	+	.	ID=Dca47005.1.exon3;Parent=Dca47005.1
scaffold567	Augustus	exon	126262	126315	.	+	.	ID=Dca47005.1.exon4;Parent=Dca47005.1
scaffold567	Augustus	exon	126419	126510	.	+	.	ID=Dca47005.1.exon5;Parent=Dca47005.1
scaffold567	Augustus	exon	127339	127529	.	+	.	ID=Dca47005.1.exon6;Parent=Dca47005.1
scaffold567	Augustus	exon	128924	129540	.	+	.	ID=Dca47005.1.exon7;Parent=Dca47005.1