Dca47480.1
Annotation
- 2-exons
- f-1
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold578)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47480.1 |
1 |
396 |
396 |
63.38 |
396 |
57 |
2e-147
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FZN9_ARATH |
1126 |
1568 |
1864 |
23.76 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47480.1 |
3 |
373 |
396 |
30.05 |
371 |
30 |
2e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
737 |
1112 |
1539 |
24.43 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold578 |
Augustus |
mRNA |
114526 |
115806 |
. |
- |
. |
ID=Dca47480.1;Parent=Dca47480 |
| scaffold578 |
Augustus |
exon |
114526 |
115269 |
. |
- |
. |
ID=Dca47480.1.exon1;Parent=Dca47480.1 |
| scaffold578 |
Augustus |
exon |
115360 |
115806 |
. |
- |
. |
ID=Dca47480.1.exon2;Parent=Dca47480.1 |
