Carnation DB

Dca47534.1

Annotation

7-exons
f-1
sp|B9RAN9_RICCO#Nucleic acid binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1507490#GO:0003676;GO:0008270#2F0P0C
Repeat List (scaffold5793)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47534.1	230	296	576	4.68	67	40	2e-08
Target_name	Start	End	Length	Cov(%)
sp\|B9RAN9_RICCO	384	451	495	13.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47534.1	175	253	576	5.38	79	40	9e-08
Target_name	Start	End	Length	Cov(%)
AT3G48440.1	346	420	448	16.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5793	Augustus	mRNA	6236	11893	.	-	.	ID=Dca47534.1;Parent=Dca47534
scaffold5793	Augustus	exon	6236	6502	.	-	.	ID=Dca47534.1.exon1;Parent=Dca47534.1
scaffold5793	Augustus	exon	8727	8831	.	-	.	ID=Dca47534.1.exon2;Parent=Dca47534.1
scaffold5793	Augustus	exon	8936	9166	.	-	.	ID=Dca47534.1.exon3;Parent=Dca47534.1
scaffold5793	Augustus	exon	9344	9658	.	-	.	ID=Dca47534.1.exon4;Parent=Dca47534.1
scaffold5793	Augustus	exon	9808	9924	.	-	.	ID=Dca47534.1.exon5;Parent=Dca47534.1
scaffold5793	Augustus	exon	11063	11137	.	-	.	ID=Dca47534.1.exon6;Parent=Dca47534.1
scaffold5793	Augustus	exon	11273	11893	.	-	.	ID=Dca47534.1.exon7;Parent=Dca47534.1