Carnation DB

Dca47563.1

Annotation

19-exons
f-1
sp|B9IHR8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_576176#unknown#0F0P0C
AT3G56990.1 | Symbols: EDA7 | embryo sac development arrest 7 | chr3:21088358-21091976 REVERSE LENGTH=711
Repeat List (scaffold58)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47563.1	495	804	833	21.72	310	56	7e-91
Target_name	Start	End	Length	Cov(%)
sp\|B9IHR8_POPTR	342	668	691	47.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47563.1	1	108	833	9.36	108	73	7e-39
Target_name	Start	End	Length	Cov(%)
AT3G56990.1	1	107	711	15.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold58	Augustus	mRNA	106502	112608	.	+	.	ID=Dca47563.1;Parent=Dca47563
scaffold58	Augustus	exon	106502	106634	.	+	.	ID=Dca47563.1.exon1;Parent=Dca47563.1
scaffold58	Augustus	exon	107261	107359	.	+	.	ID=Dca47563.1.exon2;Parent=Dca47563.1
scaffold58	Augustus	exon	107481	107572	.	+	.	ID=Dca47563.1.exon3;Parent=Dca47563.1
scaffold58	Augustus	exon	108543	108601	.	+	.	ID=Dca47563.1.exon4;Parent=Dca47563.1
scaffold58	Augustus	exon	108686	108806	.	+	.	ID=Dca47563.1.exon5;Parent=Dca47563.1
scaffold58	Augustus	exon	109021	109089	.	+	.	ID=Dca47563.1.exon6;Parent=Dca47563.1
scaffold58	Augustus	exon	109334	109386	.	+	.	ID=Dca47563.1.exon7;Parent=Dca47563.1
scaffold58	Augustus	exon	109475	109583	.	+	.	ID=Dca47563.1.exon8;Parent=Dca47563.1
scaffold58	Augustus	exon	109793	109963	.	+	.	ID=Dca47563.1.exon9;Parent=Dca47563.1
scaffold58	Augustus	exon	110052	110210	.	+	.	ID=Dca47563.1.exon10;Parent=Dca47563.1
scaffold58	Augustus	exon	110288	110374	.	+	.	ID=Dca47563.1.exon11;Parent=Dca47563.1
scaffold58	Augustus	exon	110471	110644	.	+	.	ID=Dca47563.1.exon12;Parent=Dca47563.1
scaffold58	Augustus	exon	110791	110948	.	+	.	ID=Dca47563.1.exon13;Parent=Dca47563.1
scaffold58	Augustus	exon	111022	111094	.	+	.	ID=Dca47563.1.exon14;Parent=Dca47563.1
scaffold58	Augustus	exon	111180	111338	.	+	.	ID=Dca47563.1.exon15;Parent=Dca47563.1
scaffold58	Augustus	exon	111415	111501	.	+	.	ID=Dca47563.1.exon16;Parent=Dca47563.1
scaffold58	Augustus	exon	111598	111771	.	+	.	ID=Dca47563.1.exon17;Parent=Dca47563.1
scaffold58	Augustus	exon	111945	112117	.	+	.	ID=Dca47563.1.exon18;Parent=Dca47563.1
scaffold58	Augustus	exon	112257	112608	.	+	.	ID=Dca47563.1.exon19;Parent=Dca47563.1