Carnation DB

Dca47604.1

Annotation

7-exons
f-1
sp|B9IBC9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_573381#unknown#0F0P0C
AT2G20330.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr2:8772888-8775518 REVERSE LENGTH=648
Repeat List (scaffold580)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47604.1	2	508	508	71.25	507	57	0
Target_name	Start	End	Length	Cov(%)
sp\|B9IBC9_POPTR	3	646	647	99.53

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47604.1	1	508	508	63.97	508	50	9e-168
Target_name	Start	End	Length	Cov(%)
AT2G20330.1	1	643	648	99.22

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold580	Augustus	mRNA	3391	8662	.	+	.	ID=Dca47604.1;Parent=Dca47604
scaffold580	Augustus	exon	3391	3789	.	+	.	ID=Dca47604.1.exon1;Parent=Dca47604.1
scaffold580	Augustus	exon	4916	5059	.	+	.	ID=Dca47604.1.exon2;Parent=Dca47604.1
scaffold580	Augustus	exon	6783	6890	.	+	.	ID=Dca47604.1.exon3;Parent=Dca47604.1
scaffold580	Augustus	exon	7213	7350	.	+	.	ID=Dca47604.1.exon4;Parent=Dca47604.1
scaffold580	Augustus	exon	7603	7854	.	+	.	ID=Dca47604.1.exon5;Parent=Dca47604.1
scaffold580	Augustus	exon	8087	8407	.	+	.	ID=Dca47604.1.exon6;Parent=Dca47604.1
scaffold580	Augustus	exon	8498	8662	.	+	.	ID=Dca47604.1.exon7;Parent=Dca47604.1