Carnation DB

Dca47630.1

Annotation

22-exons
f-1
sp|F6HCC0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g01130#GO:0016021;GO:0016192#0F1P1C
AT5G05570.1 | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:1656766-1663728 FORWARD LENGTH=1124
Repeat List (scaffold5802)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47630.1	22	1043	1044	47.7	1022	46	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HCC0_VITVI	27	1107	1108	97.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47630.1	22	1044	1044	44.54	1023	42	0
Target_name	Start	End	Length	Cov(%)
AT5G05570.1	32	1124	1124	97.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5802	Augustus	mRNA	3308	11642	.	-	.	ID=Dca47630.1;Parent=Dca47630
scaffold5802	Augustus	exon	3308	3415	.	-	.	ID=Dca47630.1.exon1;Parent=Dca47630.1
scaffold5802	Augustus	exon	3543	3626	.	-	.	ID=Dca47630.1.exon2;Parent=Dca47630.1
scaffold5802	Augustus	exon	3706	3803	.	-	.	ID=Dca47630.1.exon3;Parent=Dca47630.1
scaffold5802	Augustus	exon	3879	3947	.	-	.	ID=Dca47630.1.exon4;Parent=Dca47630.1
scaffold5802	Augustus	exon	4025	4211	.	-	.	ID=Dca47630.1.exon5;Parent=Dca47630.1
scaffold5802	Augustus	exon	4604	4700	.	-	.	ID=Dca47630.1.exon6;Parent=Dca47630.1
scaffold5802	Augustus	exon	4807	4862	.	-	.	ID=Dca47630.1.exon7;Parent=Dca47630.1
scaffold5802	Augustus	exon	5162	5279	.	-	.	ID=Dca47630.1.exon8;Parent=Dca47630.1
scaffold5802	Augustus	exon	5813	5937	.	-	.	ID=Dca47630.1.exon9;Parent=Dca47630.1
scaffold5802	Augustus	exon	6193	6454	.	-	.	ID=Dca47630.1.exon10;Parent=Dca47630.1
scaffold5802	Augustus	exon	6532	6815	.	-	.	ID=Dca47630.1.exon11;Parent=Dca47630.1
scaffold5802	Augustus	exon	7172	7299	.	-	.	ID=Dca47630.1.exon12;Parent=Dca47630.1
scaffold5802	Augustus	exon	7425	7497	.	-	.	ID=Dca47630.1.exon13;Parent=Dca47630.1
scaffold5802	Augustus	exon	7587	7685	.	-	.	ID=Dca47630.1.exon14;Parent=Dca47630.1
scaffold5802	Augustus	exon	7805	8014	.	-	.	ID=Dca47630.1.exon15;Parent=Dca47630.1
scaffold5802	Augustus	exon	8111	8446	.	-	.	ID=Dca47630.1.exon16;Parent=Dca47630.1
scaffold5802	Augustus	exon	8794	9169	.	-	.	ID=Dca47630.1.exon17;Parent=Dca47630.1
scaffold5802	Augustus	exon	9426	9501	.	-	.	ID=Dca47630.1.exon18;Parent=Dca47630.1
scaffold5802	Augustus	exon	10415	10517	.	-	.	ID=Dca47630.1.exon19;Parent=Dca47630.1
scaffold5802	Augustus	exon	10612	10696	.	-	.	ID=Dca47630.1.exon20;Parent=Dca47630.1
scaffold5802	Augustus	exon	10978	11132	.	-	.	ID=Dca47630.1.exon21;Parent=Dca47630.1
scaffold5802	Augustus	exon	11637	11642	.	-	.	ID=Dca47630.1.exon22;Parent=Dca47630.1