Dca48243.1
Annotation
- 2-exons
- f-1
- sp|F4NCI4_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|Q2QQV8_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g29700#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold593)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48243.1 |
4 |
423 |
446 |
40.35 |
420 |
43 |
5e-107
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCI4_BETVU |
282 |
702 |
1369 |
30.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48243.1 |
8 |
416 |
446 |
29.59 |
409 |
32 |
4e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
204 |
605 |
857 |
46.9 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold593 |
Augustus |
mRNA |
6626 |
8096 |
. |
- |
. |
ID=Dca48243.1;Parent=Dca48243 |
| scaffold593 |
Augustus |
exon |
6626 |
6696 |
. |
- |
. |
ID=Dca48243.1.exon1;Parent=Dca48243.1 |
| scaffold593 |
Augustus |
exon |
6827 |
8096 |
. |
- |
. |
ID=Dca48243.1.exon2;Parent=Dca48243.1 |
