Dca48518.1
Annotation
- 3-exons
- f-1
- sp|B9N068_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_827418#unknown#0F0P0C
- Os03t0756800-01 Uncharacterised protein family UPF0139 domain containing protein.
- Repeat List (scaffold5999)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48518.1 |
1 |
106 |
106 |
74.52 |
106 |
74 |
1e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N068_POPTR |
1 |
107 |
107 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48518.1 |
1 |
105 |
106 |
73.58 |
105 |
74 |
2e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G07960.1 |
1 |
106 |
107 |
99.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5999 |
Augustus |
mRNA |
17479 |
19174 |
. |
+ |
. |
ID=Dca48518.1;Parent=Dca48518 |
| scaffold5999 |
Augustus |
exon |
17479 |
17637 |
. |
+ |
. |
ID=Dca48518.1.exon1;Parent=Dca48518.1 |
| scaffold5999 |
Augustus |
exon |
17743 |
17843 |
. |
+ |
. |
ID=Dca48518.1.exon2;Parent=Dca48518.1 |
| scaffold5999 |
Augustus |
exon |
19114 |
19174 |
. |
+ |
. |
ID=Dca48518.1.exon3;Parent=Dca48518.1 |
