Carnation DB

Dca48551.1

Annotation

7-exons
f-1
sp|F6I6I8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0046g03350#GO:0016787#1F0P0C
Os04t0683100-01 Similar to Cleavage and polyadenylation specificity factor 5.
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48551.1	2	200	201	89.55	199	91	9e-106
Target_name	Start	End	Length	Cov(%)
sp\|F6I6I8_VITVI	36	234	235	84.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48551.1	11	201	201	83.58	191	88	1e-100
Target_name	Start	End	Length	Cov(%)
Os04t0683100-01	12	202	203	94.08

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augus-PASA	mRNA	286200	289739	.	+	.	ID=Dca48551.1;Parent=Dca48551
scaffold6	Augus-PASA	exon	286200	286321	.	+	.	ID=Dca48551.1.exon1;Parent=Dca48551.1
scaffold6	Augus-PASA	exon	287453	287498	.	+	.	ID=Dca48551.1.exon2;Parent=Dca48551.1
scaffold6	Augus-PASA	exon	288440	288533	.	+	.	ID=Dca48551.1.exon3;Parent=Dca48551.1
scaffold6	Augus-PASA	exon	288610	288683	.	+	.	ID=Dca48551.1.exon4;Parent=Dca48551.1
scaffold6	Augus-PASA	exon	289205	289291	.	+	.	ID=Dca48551.1.exon5;Parent=Dca48551.1
scaffold6	Augus-PASA	exon	289391	289501	.	+	.	ID=Dca48551.1.exon6;Parent=Dca48551.1
scaffold6	Augus-PASA	exon	289668	289739	.	+	.	ID=Dca48551.1.exon7;Parent=Dca48551.1