Carnation DB

Dca48576.1

Annotation

5-exons
f-1
sp|E0CPM7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g14040#GO:0004553;GO:0005975#1F1P0C
AT1G19940.1 | Symbols: AtGH9B5, GH9B5 | glycosyl hydrolase 9B5 | chr1:6918323-6920268 REVERSE LENGTH=515
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48576.1	5	459	459	77.12	455	78	0
Target_name	Start	End	Length	Cov(%)
sp\|E0CPM7_VITVI	71	525	525	86.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48576.1	5	458	459	74.29	454	76	0
Target_name	Start	End	Length	Cov(%)
AT1G19940.1	65	515	515	87.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augustus	mRNA	489840	491661	.	+	.	ID=Dca48576.1;Parent=Dca48576
scaffold6	Augustus	exon	489840	490136	.	+	.	ID=Dca48576.1.exon1;Parent=Dca48576.1
scaffold6	Augustus	exon	490285	490719	.	+	.	ID=Dca48576.1.exon2;Parent=Dca48576.1
scaffold6	Augustus	exon	490844	490991	.	+	.	ID=Dca48576.1.exon3;Parent=Dca48576.1
scaffold6	Augustus	exon	491078	491244	.	+	.	ID=Dca48576.1.exon4;Parent=Dca48576.1
scaffold6	Augustus	exon	491329	491661	.	+	.	ID=Dca48576.1.exon5;Parent=Dca48576.1
scaffold6	Augustus	mRNA	489840	491274	.	+	.	ID=Dca48576.2;Parent=Dca48576
scaffold6	Augustus	exon	489840	490136	.	+	.	ID=Dca48576.2.exon1;Parent=Dca48576.2
scaffold6	Augustus	exon	490285	490719	.	+	.	ID=Dca48576.2.exon2;Parent=Dca48576.2
scaffold6	Augustus	exon	490844	490991	.	+	.	ID=Dca48576.2.exon3;Parent=Dca48576.2
scaffold6	Augustus	exon	491078	491274	.	+	.	ID=Dca48576.2.exon4;Parent=Dca48576.2