Carnation DB

Dca48595.1

Annotation

5-exons
f-1
sp|B9R8T3_RICCO#DNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1602040#GO:0003677#1F0P0C
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48595.1	1	411	411	49.39	411	48	3e-67
Target_name	Start	End	Length	Cov(%)
sp\|B9R8T3_RICCO	1	374	374	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48595.1	59	411	411	42.09	353	49	5e-63
Target_name	Start	End	Length	Cov(%)
Os09t0491708-02	76	359	360	78.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augustus	mRNA	599911	603507	.	+	.	ID=Dca48595.1;Parent=Dca48595
scaffold6	Augustus	exon	599911	600514	.	+	.	ID=Dca48595.1.exon1;Parent=Dca48595.1
scaffold6	Augustus	exon	601281	601333	.	+	.	ID=Dca48595.1.exon2;Parent=Dca48595.1
scaffold6	Augustus	exon	601719	601877	.	+	.	ID=Dca48595.1.exon3;Parent=Dca48595.1
scaffold6	Augustus	exon	602082	602243	.	+	.	ID=Dca48595.1.exon4;Parent=Dca48595.1
scaffold6	Augustus	exon	603250	603507	.	+	.	ID=Dca48595.1.exon5;Parent=Dca48595.1