Dca49144.1
Annotation
- 4-exons
- f-1
- sp|B9FYH3_ORYSJ#Putative uncharacterized protein#Oryza sativa subsp japonica (Rice)#ORFNames=OsJ_28234#GO:0030246#1F0P0C
- AT2G22620.1 | Symbols: | Rhamnogalacturonate lyase family protein | chr2:9604902-9610156 REVERSE LENGTH=677
- Repeat List (scaffold611)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49144.1 |
6 |
187 |
201 |
50.74 |
182 |
47 |
2e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9FYH3_ORYSJ |
288 |
508 |
511 |
43.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49144.1 |
6 |
187 |
201 |
50.74 |
182 |
47 |
2e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0554300-00 |
256 |
476 |
480 |
46.04 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold611 |
Augustus |
mRNA |
46848 |
49794 |
. |
+ |
. |
ID=Dca49144.1;Parent=Dca49144 |
| scaffold611 |
Augustus |
exon |
46848 |
46893 |
. |
+ |
. |
ID=Dca49144.1.exon1;Parent=Dca49144.1 |
| scaffold611 |
Augustus |
exon |
48828 |
48987 |
. |
+ |
. |
ID=Dca49144.1.exon2;Parent=Dca49144.1 |
| scaffold611 |
Augustus |
exon |
49280 |
49406 |
. |
+ |
. |
ID=Dca49144.1.exon3;Parent=Dca49144.1 |
| scaffold611 |
Augustus |
exon |
49522 |
49794 |
. |
+ |
. |
ID=Dca49144.1.exon4;Parent=Dca49144.1 |
