Dca49500.1
Annotation
- 4-exons
- f-1
- sp|B9HWR4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_882913#GO:0020037;GO:0004601;GO:0006979#2F1P0C
- AT1G68850.1 | Symbols: | Peroxidase superfamily protein | chr1:25883806-25885177 REVERSE LENGTH=336
- Repeat List (scaffold6199)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49500.1 |
16 |
335 |
341 |
65.68 |
320 |
70 |
2e-138
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HWR4_POPTR |
5 |
325 |
325 |
98.76 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49500.1 |
6 |
335 |
341 |
64.22 |
330 |
66 |
5e-135
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G68850.1 |
4 |
336 |
336 |
99.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6199 |
Augustus |
mRNA |
3420 |
5090 |
. |
- |
. |
ID=Dca49500.1;Parent=Dca49500 |
| scaffold6199 |
Augustus |
exon |
3420 |
3859 |
. |
- |
. |
ID=Dca49500.1.exon1;Parent=Dca49500.1 |
| scaffold6199 |
Augustus |
exon |
4281 |
4446 |
. |
- |
. |
ID=Dca49500.1.exon2;Parent=Dca49500.1 |
| scaffold6199 |
Augustus |
exon |
4542 |
4733 |
. |
- |
. |
ID=Dca49500.1.exon3;Parent=Dca49500.1 |
| scaffold6199 |
Augustus |
exon |
4863 |
5090 |
. |
- |
. |
ID=Dca49500.1.exon4;Parent=Dca49500.1 |
