Carnation DB

Dca49543.1

Annotation

5-exons
f-1
sp|D2D316_GOSHI#Phosphoglycerate dehydrogenase#Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)#unknown#GO:0016597;GO:0051287;GO:0004617;GO:0006564#3F1P0C
Repeat List (scaffold62)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49543.1	36	622	622	79.42	587	83	0
Target_name	Start	End	Length	Cov(%)
sp\|D2D316_GOSHI	4	602	602	99.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49543.1	30	622	622	76.2	593	80	0
Target_name	Start	End	Length	Cov(%)
AT4G34200.1	18	603	603	97.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold62	Augus-PASA	mRNA	340328	343029	.	-	.	ID=Dca49543.1;Parent=Dca49543
scaffold62	Augus-PASA	exon	340328	340999	.	-	.	ID=Dca49543.1.exon1;Parent=Dca49543.1
scaffold62	Augus-PASA	exon	341089	341184	.	-	.	ID=Dca49543.1.exon2;Parent=Dca49543.1
scaffold62	Augus-PASA	exon	341487	341597	.	-	.	ID=Dca49543.1.exon3;Parent=Dca49543.1
scaffold62	Augus-PASA	exon	341685	342061	.	-	.	ID=Dca49543.1.exon4;Parent=Dca49543.1
scaffold62	Augus-PASA	exon	342417	343029	.	-	.	ID=Dca49543.1.exon5;Parent=Dca49543.1