Dca49592.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold6209)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49592.1 |
1 |
209 |
215 |
60 |
209 |
53 |
8e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
648 |
893 |
896 |
27.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49592.1 |
27 |
194 |
215 |
31.16 |
168 |
33 |
7e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1177 |
1378 |
1401 |
14.41 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6209 |
Augustus |
mRNA |
1394 |
2152 |
. |
+ |
. |
ID=Dca49592.1;Parent=Dca49592 |
| scaffold6209 |
Augustus |
exon |
1394 |
1571 |
. |
+ |
. |
ID=Dca49592.1.exon1;Parent=Dca49592.1 |
| scaffold6209 |
Augustus |
exon |
1683 |
2152 |
. |
+ |
. |
ID=Dca49592.1.exon2;Parent=Dca49592.1 |
