Carnation DB

Dca49689.1

Annotation

7-exons
f-1
sp|D7M1P5_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_489184#GO:0003878;GO:0000166;GO:0004775;GO:0006099#3F1P0C
AT5G08300.1 | Symbols: | Succinyl-CoA ligase, alpha subunit | chr5:2667579-2669672 FORWARD LENGTH=347
Repeat List (scaffold623)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49689.1	25	332	333	84.98	308	92	7e-164
Target_name	Start	End	Length	Cov(%)
sp\|D7M1P5_ARALL	31	338	339	90.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49689.1	4	332	333	85.88	329	84	4e-164
Target_name	Start	End	Length	Cov(%)
AT5G08300.1	2	345	347	99.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold623	Augus-PASA	mRNA	123276	128341	.	-	.	ID=Dca49689.1;Parent=Dca49689
scaffold623	Augus-PASA	exon	123276	123415	.	-	.	ID=Dca49689.1.exon1;Parent=Dca49689.1
scaffold623	Augus-PASA	exon	123938	124019	.	-	.	ID=Dca49689.1.exon2;Parent=Dca49689.1
scaffold623	Augus-PASA	exon	124848	124909	.	-	.	ID=Dca49689.1.exon3;Parent=Dca49689.1
scaffold623	Augus-PASA	exon	125201	125324	.	-	.	ID=Dca49689.1.exon4;Parent=Dca49689.1
scaffold623	Augus-PASA	exon	126641	126811	.	-	.	ID=Dca49689.1.exon5;Parent=Dca49689.1
scaffold623	Augus-PASA	exon	127155	127364	.	-	.	ID=Dca49689.1.exon6;Parent=Dca49689.1
scaffold623	Augus-PASA	exon	128129	128341	.	-	.	ID=Dca49689.1.exon7;Parent=Dca49689.1