Dca49952.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold63)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49952.1 |
1 |
590 |
590 |
50.16 |
590 |
47 |
3e-159
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
179 |
780 |
1501 |
40.1 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49952.1 |
169 |
590 |
590 |
26.77 |
422 |
38 |
2e-75
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
411 |
806 |
1539 |
25.73 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold63 |
Augustus |
mRNA |
276918 |
279740 |
. |
+ |
. |
ID=Dca49952.1;Parent=Dca49952 |
| scaffold63 |
Augustus |
exon |
276918 |
277398 |
. |
+ |
. |
ID=Dca49952.1.exon1;Parent=Dca49952.1 |
| scaffold63 |
Augustus |
exon |
278449 |
279740 |
. |
+ |
. |
ID=Dca49952.1.exon2;Parent=Dca49952.1 |
