Dca50086.1
Annotation
- 4-exons
- f-1
- sp|B9H570_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_558577#GO:0016021;GO:0005524;GO:0004674#2F0P1C
- Os11t0569300-00 Serine/threonine protein kinase domain containing protein.
- Repeat List (scaffold633)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50086.1 |
25 |
288 |
651 |
13.51 |
264 |
33 |
4e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H570_POPTR |
219 |
482 |
1011 |
26.11 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50086.1 |
29 |
288 |
651 |
13.97 |
260 |
32 |
4e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0569300-00 |
290 |
575 |
1072 |
26.67 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold633 |
Augustus |
mRNA |
30427 |
34765 |
. |
+ |
. |
ID=Dca50086.1;Parent=Dca50086 |
| scaffold633 |
Augustus |
exon |
30427 |
30919 |
. |
+ |
. |
ID=Dca50086.1.exon1;Parent=Dca50086.1 |
| scaffold633 |
Augustus |
exon |
31772 |
32917 |
. |
+ |
. |
ID=Dca50086.1.exon2;Parent=Dca50086.1 |
| scaffold633 |
Augustus |
exon |
33050 |
33279 |
. |
+ |
. |
ID=Dca50086.1.exon3;Parent=Dca50086.1 |
| scaffold633 |
Augustus |
exon |
34679 |
34765 |
. |
+ |
. |
ID=Dca50086.1.exon4;Parent=Dca50086.1 |
