Carnation DB

Dca50103.1

Annotation

6-exons
f-1
sp|B9HRF5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_649314#unknown#0F0P0C
sp|B9RHE0_RICCO#NADH dehydrogenase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1450680#unknown#0F0P0C
Repeat List (scaffold6331)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50103.1	1	114	558	15.77	114	78	3e-49
Target_name	Start	End	Length	Cov(%)
sp\|B9HRF5_POPTR	1	114	116	98.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50103.1	2	114	558	14.69	113	73	8e-48
Target_name	Start	End	Length	Cov(%)
AT4G34700.1	3	115	117	96.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6331	Augustus	mRNA	12082	17377	.	-	.	ID=Dca50103.1;Parent=Dca50103
scaffold6331	Augustus	exon	12082	13405	.	-	.	ID=Dca50103.1.exon1;Parent=Dca50103.1
scaffold6331	Augustus	exon	14728	14771	.	-	.	ID=Dca50103.1.exon2;Parent=Dca50103.1
scaffold6331	Augustus	exon	15307	15362	.	-	.	ID=Dca50103.1.exon3;Parent=Dca50103.1
scaffold6331	Augustus	exon	16102	16183	.	-	.	ID=Dca50103.1.exon4;Parent=Dca50103.1
scaffold6331	Augustus	exon	17108	17149	.	-	.	ID=Dca50103.1.exon5;Parent=Dca50103.1
scaffold6331	Augustus	exon	17249	17377	.	-	.	ID=Dca50103.1.exon6;Parent=Dca50103.1