Dca50481.1
Annotation
- 3-exons
- f-1
- sp|A5APP5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_032622#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold6414)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50481.1 |
1 |
503 |
534 |
64.23 |
503 |
60 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5APP5_VITVI |
6 |
566 |
1250 |
44.88 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50481.1 |
245 |
504 |
534 |
18.53 |
260 |
38 |
2e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
492 |
746 |
1428 |
17.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6414 |
Augustus |
mRNA |
3452 |
5559 |
. |
- |
. |
ID=Dca50481.1;Parent=Dca50481 |
| scaffold6414 |
Augustus |
exon |
3452 |
3550 |
. |
- |
. |
ID=Dca50481.1.exon1;Parent=Dca50481.1 |
| scaffold6414 |
Augustus |
exon |
3748 |
4913 |
. |
- |
. |
ID=Dca50481.1.exon2;Parent=Dca50481.1 |
| scaffold6414 |
Augustus |
exon |
5220 |
5559 |
. |
- |
. |
ID=Dca50481.1.exon3;Parent=Dca50481.1 |
