Dca50532.1
Annotation
- 2-exons
- f-1
- sp|Q9SJ38_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g05200#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- Repeat List (scaffold6427)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50532.1 |
2 |
258 |
330 |
34.24 |
257 |
44 |
3e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SJ38_ARATH |
410 |
666 |
1229 |
20.91 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50532.1 |
2 |
259 |
330 |
27.57 |
258 |
35 |
2e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
435 |
692 |
857 |
30.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6427 |
Augustus |
mRNA |
6443 |
10964 |
. |
- |
. |
ID=Dca50532.1;Parent=Dca50532 |
| scaffold6427 |
Augustus |
exon |
6443 |
6661 |
. |
- |
. |
ID=Dca50532.1.exon1;Parent=Dca50532.1 |
| scaffold6427 |
Augustus |
exon |
10191 |
10964 |
. |
- |
. |
ID=Dca50532.1.exon2;Parent=Dca50532.1 |
