Carnation DB

Dca51235.1

Annotation

5-exons
f-1
sp|B9HMA8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1085734#unknown#0F0P0C
Os05t0400600-01 Cobalt transport protein family protein.
Repeat List (scaffold660)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51235.1	55	270	519	27.36	216	56	5e-71
Target_name	Start	End	Length	Cov(%)
sp\|B9HMA8_POPTR	58	314	382	67.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51235.1	48	266	519	25.43	219	51	2e-70
Target_name	Start	End	Length	Cov(%)
Os05t0400600-01	58	317	389	66.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold660	Augustus	mRNA	96378	101295	.	-	.	ID=Dca51235.1;Parent=Dca51235
scaffold660	Augustus	exon	96378	97138	.	-	.	ID=Dca51235.1.exon1;Parent=Dca51235.1
scaffold660	Augustus	exon	97357	97432	.	-	.	ID=Dca51235.1.exon2;Parent=Dca51235.1
scaffold660	Augustus	exon	97549	97713	.	-	.	ID=Dca51235.1.exon3;Parent=Dca51235.1
scaffold660	Augustus	exon	97986	98222	.	-	.	ID=Dca51235.1.exon4;Parent=Dca51235.1
scaffold660	Augustus	exon	100975	101295	.	-	.	ID=Dca51235.1.exon5;Parent=Dca51235.1