Carnation DB

Dca51262.1

Annotation

12-exons
f-1
sp|B9N1K7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_263578#GO:0043169;GO:0004553;GO:0005975#2F1P0C
Os04t0513100-01 Similar to Beta-glucosidase.
Repeat List (scaffold661)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51262.1	14	482	490	59.18	469	62	6e-176
Target_name	Start	End	Length	Cov(%)
sp\|B9N1K7_POPTR	1	469	469	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51262.1	7	483	490	50	477	51	4e-143
Target_name	Start	End	Length	Cov(%)
Os04t0513100-01	19	496	517	92.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold661	Augus-PASA	mRNA	92887	99359	.	+	.	ID=Dca51262.1;Parent=Dca51262
scaffold661	Augus-PASA	exon	92887	92979	.	+	.	ID=Dca51262.1.exon1;Parent=Dca51262.1
scaffold661	Augus-PASA	exon	93081	93147	.	+	.	ID=Dca51262.1.exon2;Parent=Dca51262.1
scaffold661	Augus-PASA	exon	95498	95556	.	+	.	ID=Dca51262.1.exon3;Parent=Dca51262.1
scaffold661	Augus-PASA	exon	95863	95938	.	+	.	ID=Dca51262.1.exon4;Parent=Dca51262.1
scaffold661	Augus-PASA	exon	96065	96139	.	+	.	ID=Dca51262.1.exon5;Parent=Dca51262.1
scaffold661	Augus-PASA	exon	96509	96596	.	+	.	ID=Dca51262.1.exon6;Parent=Dca51262.1
scaffold661	Augus-PASA	exon	96815	97067	.	+	.	ID=Dca51262.1.exon7;Parent=Dca51262.1
scaffold661	Augus-PASA	exon	97604	97719	.	+	.	ID=Dca51262.1.exon8;Parent=Dca51262.1
scaffold661	Augus-PASA	exon	97905	98160	.	+	.	ID=Dca51262.1.exon9;Parent=Dca51262.1
scaffold661	Augus-PASA	exon	98396	98498	.	+	.	ID=Dca51262.1.exon10;Parent=Dca51262.1
scaffold661	Augus-PASA	exon	98727	98829	.	+	.	ID=Dca51262.1.exon11;Parent=Dca51262.1
scaffold661	Augus-PASA	exon	99176	99359	.	+	.	ID=Dca51262.1.exon12;Parent=Dca51262.1