Carnation DB

Dca516.1

Annotation

7-exons
f-1
sp|B9I389_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_422519#GO:0016491#1F0P0C
Os09t0368200-00 Similar to polyamine oxidase precursor.
Repeat List (scaffold101)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca516.1	19	333	339	52.21	315	55	3e-99
Target_name	Start	End	Length	Cov(%)
sp\|B9I389_POPTR	25	347	460	70.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca516.1	20	338	339	47.19	319	49	1e-82
Target_name	Start	End	Length	Cov(%)
Os09t0368200-00	33	362	497	66.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold101	Augustus	mRNA	54551	56254	.	-	.	ID=Dca516.1;Parent=Dca516
scaffold101	Augustus	exon	54551	54571	.	-	.	ID=Dca516.1.exon1;Parent=Dca516.1
scaffold101	Augustus	exon	54746	54895	.	-	.	ID=Dca516.1.exon2;Parent=Dca516.1
scaffold101	Augustus	exon	54987	55130	.	-	.	ID=Dca516.1.exon3;Parent=Dca516.1
scaffold101	Augustus	exon	55279	55522	.	-	.	ID=Dca516.1.exon4;Parent=Dca516.1
scaffold101	Augustus	exon	55608	55733	.	-	.	ID=Dca516.1.exon5;Parent=Dca516.1
scaffold101	Augustus	exon	55837	56086	.	-	.	ID=Dca516.1.exon6;Parent=Dca516.1
scaffold101	Augustus	exon	56170	56254	.	-	.	ID=Dca516.1.exon7;Parent=Dca516.1