Carnation DB

Dca520.1

Annotation

8-exons
f-1
sp|C6T4B4_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#unknown#0F0P0C
sp|G7I5K2_MEDTR#F-box protein PP2-B1#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_1g079180#unknown#0F0P0C
Repeat List (scaffold101)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca520.1	1	233	677	11.96	233	32	1e-17
Target_name	Start	End	Length	Cov(%)
sp\|C6T4B4_SOYBN	1	253	254	99.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca520.1	234	500	677	12.55	267	32	3e-25
Target_name	Start	End	Length	Cov(%)
AT5G24560.1	5	242	251	94.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold101	Augustus	mRNA	77757	83900	.	+	.	ID=Dca520.1;Parent=Dca520
scaffold101	Augustus	exon	77757	78011	.	+	.	ID=Dca520.1.exon1;Parent=Dca520.1
scaffold101	Augustus	exon	78104	78222	.	+	.	ID=Dca520.1.exon2;Parent=Dca520.1
scaffold101	Augustus	exon	78560	78885	.	+	.	ID=Dca520.1.exon3;Parent=Dca520.1
scaffold101	Augustus	exon	79549	79802	.	+	.	ID=Dca520.1.exon4;Parent=Dca520.1
scaffold101	Augustus	exon	80019	80134	.	+	.	ID=Dca520.1.exon5;Parent=Dca520.1
scaffold101	Augustus	exon	80231	80658	.	+	.	ID=Dca520.1.exon6;Parent=Dca520.1
scaffold101	Augustus	exon	83256	83328	.	+	.	ID=Dca520.1.exon7;Parent=Dca520.1
scaffold101	Augustus	exon	83438	83900	.	+	.	ID=Dca520.1.exon8;Parent=Dca520.1