Carnation DB

Dca52010.1

Annotation

5-exons
f-1
sp|B9HBI5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_562052#GO:0005488#1F0P0C
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helicases | chr1:4323722-4326227 REVERSE LENGTH=735
Repeat List (scaffold680)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52010.1	9	353	355	33.8	345	33	3e-49
Target_name	Start	End	Length	Cov(%)
sp\|B9HBI5_POPTR	109	420	597	52.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52010.1	198	355	355	15.49	158	34	1e-19
Target_name	Start	End	Length	Cov(%)
AT1G12700.1	188	347	735	21.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold680	Augustus	mRNA	10065	11907	.	-	.	ID=Dca52010.1;Parent=Dca52010
scaffold680	Augustus	exon	10065	10513	.	-	.	ID=Dca52010.1.exon1;Parent=Dca52010.1
scaffold680	Augustus	exon	10777	10842	.	-	.	ID=Dca52010.1.exon2;Parent=Dca52010.1
scaffold680	Augustus	exon	10921	11019	.	-	.	ID=Dca52010.1.exon3;Parent=Dca52010.1
scaffold680	Augustus	exon	11387	11666	.	-	.	ID=Dca52010.1.exon4;Parent=Dca52010.1
scaffold680	Augustus	exon	11734	11907	.	-	.	ID=Dca52010.1.exon5;Parent=Dca52010.1