Carnation DB

Dca52328.1

Annotation

22-exons
f-1
sp|B9MTW7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_917423#unknown#0F0P0C
Os01t0187400-01 Similar to glycine-rich protein.
Repeat List (scaffold689)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52328.1	8	1395	1395	67.31	1388	65	0
Target_name	Start	End	Length	Cov(%)
sp\|B9MTW7_POPTR	1	1440	1442	99.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52328.1	55	1395	1395	61.93	1341	62	0
Target_name	Start	End	Length	Cov(%)
AT5G47020.1	37	1419	1421	97.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold689	Augustus	mRNA	9735	20420	.	-	.	ID=Dca52328.1;Parent=Dca52328
scaffold689	Augustus	exon	9735	9888	.	-	.	ID=Dca52328.1.exon1;Parent=Dca52328.1
scaffold689	Augustus	exon	9982	10067	.	-	.	ID=Dca52328.1.exon2;Parent=Dca52328.1
scaffold689	Augustus	exon	10198	10437	.	-	.	ID=Dca52328.1.exon3;Parent=Dca52328.1
scaffold689	Augustus	exon	10523	10712	.	-	.	ID=Dca52328.1.exon4;Parent=Dca52328.1
scaffold689	Augustus	exon	10826	11115	.	-	.	ID=Dca52328.1.exon5;Parent=Dca52328.1
scaffold689	Augustus	exon	11200	11388	.	-	.	ID=Dca52328.1.exon6;Parent=Dca52328.1
scaffold689	Augustus	exon	11539	11773	.	-	.	ID=Dca52328.1.exon7;Parent=Dca52328.1
scaffold689	Augustus	exon	12064	12113	.	-	.	ID=Dca52328.1.exon8;Parent=Dca52328.1
scaffold689	Augustus	exon	12200	12471	.	-	.	ID=Dca52328.1.exon9;Parent=Dca52328.1
scaffold689	Augustus	exon	12545	12653	.	-	.	ID=Dca52328.1.exon10;Parent=Dca52328.1
scaffold689	Augustus	exon	13048	13141	.	-	.	ID=Dca52328.1.exon11;Parent=Dca52328.1
scaffold689	Augustus	exon	13844	14168	.	-	.	ID=Dca52328.1.exon12;Parent=Dca52328.1
scaffold689	Augustus	exon	14311	14520	.	-	.	ID=Dca52328.1.exon13;Parent=Dca52328.1
scaffold689	Augustus	exon	15085	15202	.	-	.	ID=Dca52328.1.exon14;Parent=Dca52328.1
scaffold689	Augustus	exon	15898	15997	.	-	.	ID=Dca52328.1.exon15;Parent=Dca52328.1
scaffold689	Augustus	exon	16107	16162	.	-	.	ID=Dca52328.1.exon16;Parent=Dca52328.1
scaffold689	Augustus	exon	16548	16625	.	-	.	ID=Dca52328.1.exon17;Parent=Dca52328.1
scaffold689	Augustus	exon	16758	16883	.	-	.	ID=Dca52328.1.exon18;Parent=Dca52328.1
scaffold689	Augustus	exon	16968	17087	.	-	.	ID=Dca52328.1.exon19;Parent=Dca52328.1
scaffold689	Augustus	exon	17580	17788	.	-	.	ID=Dca52328.1.exon20;Parent=Dca52328.1
scaffold689	Augustus	exon	18832	18944	.	-	.	ID=Dca52328.1.exon21;Parent=Dca52328.1
scaffold689	Augustus	exon	19597	20420	.	-	.	ID=Dca52328.1.exon22;Parent=Dca52328.1